amantahiliani/FHIR-Sandbox
1
0
Fork 0
mirror of https://github.com/AmanTahiliani/FHIR-Sandbox.git synced 2026-08-07 19:56:17 -04:00
Code Issues Packages Projects Releases Wiki Activity

UI Upgrades

Browse Source
This commit is contained in:
Aman Tahiliani
2026-02-20 23:59:46 -05:00
parent 2171991dc8
commit c25b6e0c80
15 changed files with 2494 additions and 892 deletions
Download Patch File Download Diff File Expand all files Collapse all files

102
app/db/db.go
View File

@@ -239,12 +239,81 @@ var migrations = []migration{
CREATE INDEX IF NOT EXISTS idx_allergy_intolerances_patient ON allergy_intolerances(patient_fhir_id, ehr_url);
`,
},
// Future migrations: append new entries here with incrementing version numbers.
// Example:
// {
// version: 2,
// sql: `ALTER TABLE users ADD COLUMN phone TEXT NOT NULL DEFAULT '';`,
// },
{
version: 5,
sql: `
ALTER TABLE allergy_intolerances ADD COLUMN reaction_severity TEXT NOT NULL DEFAULT '';
ALTER TABLE allergy_intolerances ADD COLUMN reaction_manifestation TEXT NOT NULL DEFAULT '';
`,
},
{
version: 6,
sql: `
CREATE TABLE IF NOT EXISTS immunizations (
id TEXT PRIMARY KEY,
fhir_id TEXT NOT NULL,
ehr_url TEXT NOT NULL,
patient_fhir_id TEXT NOT NULL,
status TEXT NOT NULL DEFAULT '',
vaccine_text TEXT NOT NULL DEFAULT '',
vaccine_system TEXT NOT NULL DEFAULT '',
vaccine_code TEXT NOT NULL DEFAULT '',
occurrence_date TEXT NOT NULL DEFAULT '',
primary_source INTEGER NOT NULL DEFAULT 0,
lot_number TEXT NOT NULL DEFAULT '',
synced_at DATETIME NOT NULL DEFAULT CURRENT_TIMESTAMP,
UNIQUE(fhir_id, ehr_url)
);
CREATE INDEX IF NOT EXISTS idx_immunizations_patient ON immunizations(patient_fhir_id, ehr_url);
`,
},
{
version: 7,
sql: `
CREATE TABLE IF NOT EXISTS procedures (
id TEXT PRIMARY KEY,
fhir_id TEXT NOT NULL,
ehr_url TEXT NOT NULL,
patient_fhir_id TEXT NOT NULL,
status TEXT NOT NULL DEFAULT '',
code_text TEXT NOT NULL DEFAULT '',
code_system TEXT NOT NULL DEFAULT '',
code_code TEXT NOT NULL DEFAULT '',
performed_date TEXT NOT NULL DEFAULT '',
reason_text TEXT NOT NULL DEFAULT '',
outcome TEXT NOT NULL DEFAULT '',
synced_at DATETIME NOT NULL DEFAULT CURRENT_TIMESTAMP,
UNIQUE(fhir_id, ehr_url)
);
CREATE INDEX IF NOT EXISTS idx_procedures_patient ON procedures(patient_fhir_id, ehr_url);
`,
},
{
version: 8,
sql: `
CREATE TABLE IF NOT EXISTS encounters (
id TEXT PRIMARY KEY,
fhir_id TEXT NOT NULL,
ehr_url TEXT NOT NULL,
patient_fhir_id TEXT NOT NULL,
status TEXT NOT NULL DEFAULT '',
class TEXT NOT NULL DEFAULT '',
type_text TEXT NOT NULL DEFAULT '',
period_start TEXT NOT NULL DEFAULT '',
period_end TEXT NOT NULL DEFAULT '',
reason_text TEXT NOT NULL DEFAULT '',
synced_at DATETIME NOT NULL DEFAULT CURRENT_TIMESTAMP,
UNIQUE(fhir_id, ehr_url)
);
CREATE INDEX IF NOT EXISTS idx_encounters_patient ON encounters(patient_fhir_id, ehr_url);
`,
},
{
version: 9,
sql: `
ALTER TABLE users ADD COLUMN mrn TEXT NOT NULL DEFAULT '';
`,
},
}
// migrate applies any migrations that have not yet been run, in order.
@@ -315,6 +384,7 @@ func (s *Store) UpsertUser(u *models.User) (string, error) {
first_name = ?,
middle_name = ?,
last_name = ?,
mrn = ?,
dob = ?,
gender = ?,
email = ?,
@@ -322,7 +392,7 @@ func (s *Store) UpsertUser(u *models.User) (string, error) {
role = ?,
updated_at = ?
WHERE id = ?`,
u.FirstName, u.MiddleName, u.LastName,
u.FirstName, u.MiddleName, u.LastName, u.MRN,
u.DOB, u.Gender, u.Email,
u.FHIRResourceType, string(u.Role),
now, existingID,
@@ -342,11 +412,11 @@ func (s *Store) UpsertUser(u *models.User) (string, error) {
_, err = s.db.Exec(`
INSERT INTO users (
id, fhir_resource_type, fhir_id, ehr_url, role,
first_name, middle_name, last_name, dob, gender, email,
first_name, middle_name, last_name, mrn, dob, gender, email,
created_at, updated_at
) VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)`,
) VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)`,
id, u.FHIRResourceType, u.FHIRID, u.EHRURL, string(u.Role),
u.FirstName, u.MiddleName, u.LastName, u.DOB, u.Gender, u.Email,
u.FirstName, u.MiddleName, u.LastName, u.MRN, u.DOB, u.Gender, u.Email,
now, now,
)
if err != nil {
@@ -361,13 +431,13 @@ func (s *Store) GetUserByFHIRID(fhirID, ehrURL string) (*models.User, error) {
u := &models.User{}
err := s.db.QueryRow(`
SELECT id, fhir_resource_type, fhir_id, ehr_url, role,
first_name, middle_name, last_name, dob, gender, email,
first_name, middle_name, last_name, mrn, dob, gender, email,
created_at, updated_at
FROM users WHERE fhir_id = ? AND ehr_url = ?`,
fhirID, ehrURL,
).Scan(
&u.ID, &u.FHIRResourceType, &u.FHIRID, &u.EHRURL, &u.Role,
&u.FirstName, &u.MiddleName, &u.LastName, &u.DOB, &u.Gender, &u.Email,
&u.FirstName, &u.MiddleName, &u.LastName, &u.MRN, &u.DOB, &u.Gender, &u.Email,
&u.CreatedAt, &u.UpdatedAt,
)
if err != nil {
@@ -381,12 +451,12 @@ func (s *Store) GetUserByID(id string) (*models.User, error) {
u := &models.User{}
err := s.db.QueryRow(`
SELECT id, fhir_resource_type, fhir_id, ehr_url, role,
first_name, middle_name, last_name, dob, gender, email,
first_name, middle_name, last_name, mrn, dob, gender, email,
created_at, updated_at
FROM users WHERE id = ?`, id,
).Scan(
&u.ID, &u.FHIRResourceType, &u.FHIRID, &u.EHRURL, &u.Role,
&u.FirstName, &u.MiddleName, &u.LastName, &u.DOB, &u.Gender, &u.Email,
&u.FirstName, &u.MiddleName, &u.LastName, &u.MRN, &u.DOB, &u.Gender, &u.Email,
&u.CreatedAt, &u.UpdatedAt,
)
if err != nil {
@@ -399,7 +469,7 @@ func (s *Store) GetUserByID(id string) (*models.User, error) {
func (s *Store) ListUsersByRole(role models.Role, ehrURL string) ([]models.User, error) {
rows, err := s.db.Query(`
SELECT id, fhir_resource_type, fhir_id, ehr_url, role,
first_name, middle_name, last_name, dob, gender, email,
first_name, middle_name, last_name, mrn, dob, gender, email,
created_at, updated_at
FROM users WHERE role = ? AND ehr_url = ?
ORDER BY last_name ASC, first_name ASC`,
@@ -415,7 +485,7 @@ func (s *Store) ListUsersByRole(role models.Role, ehrURL string) ([]models.User,
var u models.User
if err := rows.Scan(
&u.ID, &u.FHIRResourceType, &u.FHIRID, &u.EHRURL, &u.Role,
&u.FirstName, &u.MiddleName, &u.LastName, &u.DOB, &u.Gender, &u.Email,
&u.FirstName, &u.MiddleName, &u.LastName, &u.MRN, &u.DOB, &u.Gender, &u.Email,
&u.CreatedAt, &u.UpdatedAt,
); err != nil {
return nil, fmt.Errorf("db: scan user: %w", err)